Journey
Farmer compliance checklist
A comprehensive compliance checklist for UK farmers covering livestock, environmental, animal welfare, health and safety, financial, and scheme obligations. Includes frequency of compliance tasks, enforcement bodies, and consequences of non-compliance.
Farm compliance at a glance
Farming is one of the most heavily regulated industries in the UK. This checklist brings together your key compliance obligations across livestock, environment, animal welfare, health and safety, tax, and scheme requirements.
Use this journey to understand what you must do, how often, who enforces it, and what happens if you don't comply. Each section signposts to detailed guides where you can find step-by-step instructions.
Prepare for farm inspections
Understand who inspects farms, what triggers inspections, how to prepare, and your rights during visits.
-
Livestock compliance
If you keep cattle, sheep, goats, pigs, or poultry, you have legal obligations for registration, identification, movement reporting, disease testing, and record keeping. These are strictly enforced by the Animal and Plant Health Agency (APHA).
-
1 Bovine TB testing
All cattle keepers must comply with TB testing requirements. Failure results in automatic movement restrictions.
Comply with bovine TB testing requirements
Testing frequencies by risk area, pre-movement and post-movement testing, and what happens during a TB breakdown.
-
2 Livestock identification and tagging
All livestock must be correctly identified within legal deadlines before they can be moved.
Identify and tag livestock
Species-specific tagging requirements, deadlines, and EID requirements for cattle, sheep, goats, pigs, and deer.
-
3 Movement reporting and standstill
Every livestock movement on or off your holding must be reported within legal deadlines. Standstill periods apply when animals arrive.
Report livestock movements
How to report movements for cattle, sheep, goats, and pigs through BCMS, LIS, and eAML2 systems.
-
4 Holding registers
You must maintain accurate records of all animals on your holding, all movements in and out, births, and deaths.
Keep holding registers
Species-specific register requirements, what to record, how long to keep records, and annual inventory requirements.
-
5 Notifiable disease reporting
You must report suspected notifiable diseases to APHA immediately. Failure to report is a criminal offence.
Recognise and report notifiable animal diseases
How to identify signs of FMD, avian flu, anthrax, and other notifiable diseases and report them to APHA.
-
Environmental compliance
Environmental regulations apply to all farms regardless of whether you receive scheme payments. These cover water protection, fertiliser use, pesticide application, and landscape features.
-
1 Farming Rules for Water
Legal requirements to prevent water pollution from farming activities. Apply to all farmers, not just those in Nitrate Vulnerable Zones.
Comply with farming environmental regulations
Fertiliser storage and application rules, buffer strips, pesticide regulations, and nutrient management planning.
-
2 Nitrate Vulnerable Zones (NVZ)
If your land is in an NVZ (about 55% of England), stricter rules apply on nitrogen application, closed periods, and record keeping.
-
3 Pesticide application
Anyone applying professional pesticides must hold valid certificates. All sprayers must be tested regularly.
-
4 Rules that replaced cross-compliance (scheme participants)
Cross-compliance ended on 31 December 2023. There is no "conditionality" regime in England: the baseline is domestic law that applies to every farm (Farming Rules for Water, NVZ rules, the Management of Hedgerows (England) Regulations 2024, permits, and animal identification law), plus the terms of any scheme agreement you hold.
-
Animal welfare compliance
You have a legal duty of care under the Animal Welfare Act 2006 to ensure the welfare of animals under your control. This means meeting the five welfare needs for all species you keep.
-
1 The five welfare needs
By law, you must provide for animals':
- Need for a suitable environment - appropriate housing, shelter, space
- Need for a suitable diet - adequate food and water
- Need to exhibit normal behaviour - space and facilities for natural behaviours
- Need to be housed with or apart from other animals - appropriate social groupings
- Need to be protected from pain, suffering, injury and disease - health management and prompt treatment
gov.uk
Welfare codes of practice (opens in a new tab)
Species-specific welfare codes provide detailed guidance on meeting legal requirements.
-
2 Annual Health and Welfare Review
The funded Annual Health and Welfare Review provides a vet visit to assess your livestock health and welfare. While optional, it demonstrates good practice and can identify issues before they become serious.
Join the Animal Health and Welfare Pathway
Eligibility, payment rates by species, and how to book and claim funded annual vet reviews.
-
Health and safety compliance
Agriculture has one of the highest rates of workplace fatalities and injuries of any UK industry. You have legal duties under the Health and Safety at Work etc. Act 1974 to protect yourself, employees, and visitors.
Meet workplace health and safety requirements
Comprehensive H&S compliance including risk assessment, fire safety, PPE, manual handling, and work at height.
-
1 Key farm H&S requirements
Priority areas for farm health and safety:
- Risk assessments: Assess risks from all work activities. Record if you have 5+ employees
- Machinery safety: Guards on PTOs, safe stopping procedures, competent operators
- Livestock handling: Safe handling facilities, escape routes, training for workers
- Chemical storage: COSHH assessments, secure storage, PPE for handling
- Work at height: Safe systems for roof work, tree work, grain storage
- Lone working: Check-in systems, emergency procedures
hse.gov.uk
HSE agriculture guidance (opens in a new tab)
Health and Safety Executive guidance specifically for farming operations.
-
2 If you employ workers
Employers have additional duties including employer's liability insurance (mandatory), training, supervision, and welfare facilities.
-
Financial and tax compliance
Your tax obligations depend on your business structure. All farmers must keep financial records and file tax returns on time.
Manage your tax compliance
Self Assessment, VAT, Corporation Tax, record keeping, filing deadlines, and avoiding penalties.
-
1 Income and Corporation Tax
- Sole traders/partnerships: Self Assessment tax return by 31 January (online)
- Limited companies: Corporation Tax return within 12 months of year end; payment within 9 months
- Record keeping: Keep records for 5-6 years depending on structure
-
2 VAT
Register for VAT if taxable turnover exceeds the threshold. Farmers can use the Agricultural Flat Rate Scheme if below the threshold.
VAT registration
When to register, VAT schemes, and Making Tax Digital requirements.
-
3 PAYE (if you employ workers)
If you pay employees above the threshold, you must operate PAYE, deduct tax and National Insurance, and submit Real Time Information (RTI) to HMRC.
gov.uk
Setting up PAYE (opens in a new tab)
Register as an employer, run payroll, and submit RTI before or on each payday.
-
4 Inheritance Tax and succession planning
Agricultural Property Relief (APR) and Business Property Relief (BPR) can reduce or eliminate Inheritance Tax on farm assets. A reformed regime took effect on 6 April 2026 under the Finance Act 2026.
Farm Inheritance Tax changes
Understanding the APR and BPR regime in force from 6 April 2026, and planning under the new rules.
-
Scheme compliance
If you're in SFI, Countryside Stewardship, or other agri-environment schemes, you have specific obligations under your agreement.
Choose the right ELM scheme
Compare SFI, Countryside Stewardship, and Landscape Recovery to find the right fit for your farm.
-
1 SFI agreement obligations
If you have an SFI agreement, you must deliver the actions you signed up for throughout the 3-year agreement period.
-
2 Countryside Stewardship obligations
CS agreements run for 5-10 years with detailed management prescriptions for each option.
-
3 Delinked payments (BPS transition)
If you received BPS payments, delinked payments continue automatically until 2027 with no action required. However, plan for income replacement as these payments end.
Understand your delinked payments
Payment schedule, reduction rates, and planning for income replacement as BPS support ends in 2027.
Compliance calendar summary
Key compliance tasks organised by frequency:
Daily
- Animal welfare checks for all livestock
- Update holding register for any births, deaths, movements
- Monitor for signs of notifiable disease
Within 3 days
- Report all livestock movements
- Record pesticide applications
Monthly
- PAYE payments to HMRC (if employer)
- Check scheme action compliance dates
Quarterly
- VAT returns (if registered)
- Review and update risk assessments
Annually
- Sheep/goat annual inventory (count on 1 December, record and return by 31 December); pig annual count on a date of your choosing
- Soil testing (at least every 3-5 years per field)
- NSTS sprayer testing (every 3 years)
- Self Assessment/Corporation Tax returns
- Employer's liability insurance renewal
- Annual Health and Welfare Review (every 10 months)
- TB testing (6-monthly to 4-yearly depending on area)
As required
- Report notifiable diseases immediately
- Pre-movement TB testing before cattle sales
- Post-movement TB testing 60-120 days after purchase
- Tag animals within species deadlines
- Report pollution incidents to Environment Agency
Getting help with compliance
Support is available to help you meet your compliance obligations: